Objective:To predict miR-130b-3p target genes by bioinformatic analysis and enrichment analysis for its molecular func-tion,biological process and signal pathway,so as to provide a theoretical basis for the further study of miR-130b-3p associated with diabetic nephropathy. Methods:Database of target gene was retrieved from the NCBI and miRbase database. The sequences of miR-130b-3p were analyzed with Vector NTI,and miR-130b-3p target genes were predicted using TargetScan,picTar,RNA22,PITA and miRanda. Functional enrichment analysis of target genes and signal pathway enrichment analysis were carried out using DAVID and KEGG database. Results:The sequence of miR-130b-3p was highly conserved among various species. GO analysis showed that miR-130b-3p was mainly enriched in nucleoplasm and cytosol. Molecular function was mainly enriched in protein binding and transcription factor activation. Classic miR-130b-3p was enriched in seven signal transduction pathways in KEGG database,including TGF-β,AMPK and endocytosis. The disease enrichment of target genes was highly relevant to diabetic nephropathy. Conclusion:The function and signaling pathway of miR-130b-3p target genes are closely related with the development and progression of diabetic nephropathy.
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Chang Kai, Jiang Zhongyong, Ren Junlong, Xiong Yisong, Wang Yanyan, Ye Yusheng, Zhu Ziyi, Xiong Jie. miR-130b-3p;糖尿病肾病;靶点预测;信号通路;富集分析[J]. Journal of Chongqing Medical University,2018,(6):788-